2027040001: Viral communities in wastewater treatment process (EF-no assembly)

Overview

Basic Information

• IMG/M Taxon OID: 2027040001
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0045482 | Gp0051457 | Ga0011133
• Sample Name: Viral communities in wastewater treatment process (EF-no assembly)
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Illinois, Urbana-Champaign
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 183839530
• Sequencing Scaffolds: 21
• Novel Protein Genes: 21
• Associated Families: 13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	14
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum → Tenacibaculum finnmarkense	2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin012	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Wastewater Viral Communities From Wastewater Treatment Facility In Singapore
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Singapore: Singapore
• Coordinates
  • Lat. (^o): 1.332
  • Long. (^o): 103.756
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000388	Metagenome / Metatranscriptome	1201	Y
F002371	Metagenome / Metatranscriptome	566	Y
F013948	Metagenome / Metatranscriptome	267	Y
F023098	Metagenome / Metatranscriptome	211	Y
F024534	Metagenome / Metatranscriptome	205	Y
F029893	Metagenome / Metatranscriptome	187	Y
F033445	Metagenome / Metatranscriptome	177	N
F041729	Metagenome	159	Y
F043390	Metagenome / Metatranscriptome	156	N
F045749	Metagenome / Metatranscriptome	152	Y
F051532	Metagenome / Metatranscriptome	144	Y
F086646	Metagenome / Metatranscriptome	110	Y
F105151	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
EFn_FTWC1V108E08VU	Not Available	526
EFn_FTWC1V108EWWHJ	Not Available	550
EFn_FTWC1V109FL3MO	Not Available	540
EFn_FTWC1V109FUKD4	Not Available	527
EFn_FTWC1V110F9ATH	Not Available	524
EFn_FTWC1V110F9O4V	Not Available	550
EFn_FTWC1V111GVOLJ	Not Available	551
EFn_FTWC1V111GYVUW	Not Available	516
EFn_FUOFX6F01A4SDA	Not Available	513
EFn_FUOFX6F01AI5OZ	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum → Tenacibaculum finnmarkense	505
EFn_FUOFX6F01AUFYF	Not Available	512
EFn_FUOFX6F01AWMTR	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	500
EFn_FUOFX6F01AYL1G	Not Available	507
EFn_FUOFX6F01B1HDR	Not Available	515
EFn_FUOFX6F01B6SI0	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin012	506
EFn_FUOFX6F01BMGM2	All Organisms → cellular organisms → Bacteria	510
EFn_FUOFX6F01CTXCA	Not Available	533
EFn_FUOFX6F01DTOJX	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum → Tenacibaculum finnmarkense	542
EFn_FUOFX6F01EMYYD	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	524
EFn_FUOFX6F02F3WE4	Not Available	517
EFn_FUOFX6F02H95ID	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	504

Sequences

Scaffold ID	Protein ID	Family	Sequence
EFn_FTWC1V108E08VU	EF_na_2121790	F024534	IDRINALPDVFMLASLVQFKYVQTISEPNDVNFVVGLAGGHQVFGEPSQYDKFMDKYLTWLEMRK
EFn_FTWC1V108EWWHJ	EF_na_3635710	F002371	MKSKKKKETRGGTRQGSGAKPKYNEQTKTVSFRCPLSKVDELKLIAKS
EFn_FTWC1V109FL3MO	EF_na_92030	F033445	KIKELKDGKRRY*TPRRIALNLLLVSIIWATPLQANDICFTEPDASKIVVELEKGRICEQEVIQYESSVKELSMQIESLKTQVETMSKKFDETMKQLETERKIASEKDKARIEEIKTAGK
EFn_FTWC1V109FUKD4	EF_na_584820	F105151	MLSEFITKNFGKDADPRVFLPLLKKVAASYVGNSAMKYVQYCEDMLNINIMDVLNNYDKVKEDLKKYNRDKNSELIQALKEMDLNKLGDKQVANAAQFLKTVGEDELTAYLLFILDNNLDIAKPKIKAFMLEFEQVLRTIKKINKPGSK
EFn_FTWC1V110F9ATH	EF_na_1778220	F002371	MAVLGVKKETRGGTRQGSGAKPKYNEQTKTVAFRCPLSKVDELKLIVKSKLSEWSVK
EFn_FTWC1V110F9O4V	EF_na_1853600	F000388	MKVIKVMKEYFQTEDEKVYFFEPLEKEISVEDMQKIVDANEKLVKELKNGKSIRK
EFn_FTWC1V111GVOLJ	EF_na_2362310	F000388	MRVIKVTREYFETEDEKVYFFEPLEKEISVEDMQKIVDANEKLIKELKE
EFn_FTWC1V111GYVUW	EF_na_5313310	F024534	MINQQFIDRIDALPDVFMLASLVQFKYIQTISQPNERNFVVGLAGGHQVFGTPEQYELFVDKYLTWLETRKP
EFn_FUOFX6F01A4SDA	EF_na_2546480	F041729	MKIFNGSVSIIKNTKGEIALKKDIEGKFSAANAAECHAKLMELSKKLKTPINKYSLFVADNGTEPIMLVNRYGNPYIALLPKRGDGNTKRNAVTKLA
EFn_FUOFX6F01AI5OZ	EF_na_3340000	F013948	MREKFKKIVAYIFRSWEDEPEPTHPRLKILPPFLLELLAYLIGLAILYQIGAYLWSIILTVY
EFn_FUOFX6F01AUFYF	EF_na_1334280	F029893	QDSVSVAANSVSANVVAGQLYEFVPTGTKVTLSCTGSNTGLRATLIANIPVMNDQAINLQNRFPIIPDDIVFQGAVRACRIVLTARNTTAGALTFFWRIDVN
EFn_FUOFX6F01AWMTR	EF_na_1004370	F043390	IIGCSTFLAVEMKNGLYGKNEDSQKVITLTLTAEQLEVIDGALEMYCMGLAEQNDPHLKYATNAHEAIYNVLESNFGVEA
EFn_FUOFX6F01AYL1G	EF_na_1647970	F000388	LKYESHKGTKEYFQTEDEKVYSSSLWKRISVEDMQKIVDANEKLVRS
EFn_FUOFX6F01B1HDR	EF_na_230320	F000388	MKVIKVTKEYFQTEDEKGFILRAFGKRISVEDMQKIVDANEKLVKEL
EFn_FUOFX6F01B6SI0	EF_na_1018660	F023098	MDERRQNWTCEAHHELVASLRDINNKLDGMIERQIAYAETSARIEEKQESIERIVTNGLSHNVANISKRLDIFCDEVKKRLDELEEFQWFRLPITRLRDSIFWYLFKIAAAGGVLYLIIHYGQELVRGTFK
EFn_FUOFX6F01BMGM2	EF_na_4396650	F024534	DDNLNKTKNKEDRIKLLPDVFMLASLVQFKYVQTISEPNDVNFVVGLAGGYEVFGTPEQYDKFMDKYLTWLEMRN
EFn_FUOFX6F01CTXCA	EF_na_1811070	F086646	LDKIKQRSWFLSVDIEDDGAVPCYDTEHELRISHGIAFKSVKILTGKTQETHPYWEALLDMSYLNSTELRDVTFKNLPGESGIYRLNIWFDYRDEELSFGDEFKKLCEFRHKWDDGWVCSKCGVRKADWVEADIKGRNDHE
EFn_FUOFX6F01DTOJX	EF_na_514410	F013948	MRESFKKIVAYIFRSWEDEPEPTHPRLKILPPFLLELLAYLIGLAILYQIGAYLWSII
EFn_FUOFX6F01EMYYD	EF_na_2185740	F045749	QGRAPDTESRQQMIQAAISPEQCSVEDLINKHECGVINGRVLDVTWLAKQCEIDGEVLPPTRTLGHILSDMGYQQIENRRVFVKKTNSQHYVWFKPSKKTDSDFAKSEVIDFLKMD
EFn_FUOFX6F02F3WE4	EF_na_1817030	F051532	MEVKDKKYEEELAEDIMKILTCYSARYYGARGGRKKKIKVENESVEI
EFn_FUOFX6F02H95ID	EF_na_2506690	F043390	MKNGLYGKNEDSQKVITLTLTAEQLEVIDGALEMYCMGLAEQNDPHLKYATNAHEAIYNVLESNFGVEA