2025206003: Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia, sample J07AB- all scaffolds

Overview

Basic Information

• IMG/M Taxon OID: 2025206003
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0045231 | Gp0051497 | Ga0011179
• Sample Name: Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia, sample J07AB- all scaffolds
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 62549170
• Sequencing Scaffolds: 4
• Novel Protein Genes: 5
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halonotius → Halonotius terrestris	2
All Organisms → Viruses → environmental samples → uncultured virus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hypersaline Water Metagenomes Of Microbial Communities From Lake Tyrrell, Victoria, Australia
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Water → Hypersaline Water Metagenomes Of Microbial Communities From Lake Tyrrell, Victoria, Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → hypersaline lake → lake water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Lake Tyrrell, Victoria, Australia
• Coordinates
  • Lat. (^o): -35.309
  • Long. (^o): 142.7795
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F054456	Metagenome	140	N
F062297	Metagenome	131	N
F076468	Metagenome	118	N

Associated Scaffolds

Scaffold	Taxonomy	Length
LTJ07As871_J07ABscf085619	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1142
LTJ07As871_J07ABscf086382	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halonotius → Halonotius terrestris	1633
LTJ07As871_J07ABscf088459	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halonotius → Halonotius terrestris	1346
LTJ07As871_J07ABscf096372	All Organisms → Viruses → environmental samples → uncultured virus	1935

Sequences

Scaffold ID	Protein ID	Family	Sequence
LTJ07As871_J07ABscf084716	LTJ07AB_243010	F076468	MTELHEIDTNTVWLSKRYWRRESETVHTDRDCDLLGKSDNPRGPVDPAVLHDDMSVCKRCDPTEPDRYGGSGTSLAYRLRHGDLKDATLDGGGST
LTJ07As871_J07ABscf085619	LTJ07AB_173880	F054456	RWESVTNLQSDDLERLEKSDRNERYLEQAEGNQGSDDPPIPGGPLADAQHLAETPRDEWGKDERAEAEEAMNFFSRTLAQFDQSEGSPLIESESPKIHKDELSLMRWGVDPDPSDDFL
LTJ07As871_J07ABscf086382	LTJ07AB_01430	F054456	DRWESVTNLQSDDLERLEKSDRNERYLEQAEGNQGSDDPPIPGGPLADAQHLAETPRDEWGKDERAEAEEAMNFFSRTLAQFDQSEGSPLIESEPPKIHKDELSLMRWGVDPDPSDDFL
LTJ07As871_J07ABscf088459	LTJ07AB_58390	F054456	VTNLQADDLERLEDSRRNELYLEQAEGNQTQDNPPLPGGPLADAQTLAATPRDEWTKDHRAEAEEAINFLSRTMPQFEQSEGEPLIEDKSPKVHKDELSIMRWGVDPKPEDDFL
LTJ07As871_J07ABscf096372	LTJ07AB_565520	F062297	MSIDEIEENPHQYTILAERVEDGRVVEQSVTGERRADELYDRWDESEQLHKLRVKRSQPMDDVTRQFEHSWPPTGNEPVSSDGGTDGWRTR