Basic Information | |
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Taxon OID | 3300034088 Open in IMG/M |
Scaffold ID | Ga0373912_0206387 Open in IMG/M |
Source Dataset Name | Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.1 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 542 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry → Uranium-Contaminated Sediments Microbial Communities After Treatment In Bioreactor, Oak Ridge, Tennessee, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Oak Ridge, Tennessee | |||||||
Coordinates | Lat. (o) | 36.0103 | Long. (o) | -84.2696 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F016826 | Metagenome | 244 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0373912_0206387_2_478 | F016826 | AGAAG | MSAKMIMRRWGILRGKEDKLVKDLKETTLSFKKLGKKYGVSRQAVLAFSKKQGIKRPVRPRGHQIEECRLCQKLIQISKKPHSEFISIHTILKKMKGSRPRCLYHLRKLRDKGLVDEKFGRLKSKRVEKAYAIYFKKRLPIRTIGRNVGIKNFQSIIRR |
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