Basic Information | |
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Taxon OID | 3300033483 Open in IMG/M |
Scaffold ID | Ga0316629_10000217 Open in IMG/M |
Source Dataset Name | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 11071 |
Total Scaffold Genes | 15 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 14 (93.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil → Wetland Microbial Communities From Old Woman Creek Delta, Ohio, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Ohio | |||||||
Coordinates | Lat. (o) | 41.3776 | Long. (o) | -82.5117 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F007558 | Metagenome / Metatranscriptome | 349 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0316629_1000021715 | F007558 | N/A | ETMQTIGEIKMLLLEILESAFQSGDVHATQQMGVNMSNAVKREGVVIIQNQNVEVYSRIMPLMVRTLKLCDAAESSWRSQTAVELEPQQKQLPPPVVDDDTDPIEACCSWLYDNHIQWQEMQDLMKARYLEYVIGRFKTKTEAAKWLGVGSTYLCKLSKTTLQAVSQN |
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