Scaffold Ga0326765_105597

Overview

Basic Information

• Taxon OID: 3300033476
• Scaffold ID: Ga0326765_105597
• Source Dataset Name: Hot spring water microbial communities from Norris Geyser Basin, Yellowstone National Park, WY, United States - NOR.RB_P
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1372
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Thermal Springs → Unclassified → Unclassified → Hot Spring Water → Hot Spring Microbial Communities From Different Geyser Basins In Yellowstone National Park, Wy, United States

Source Dataset Sampling Location

• Location Name: USA: Wyoming
• Coordinates
  • Lat. (^o): 44.7265
  • Long. (^o): -110.709

Associated Families

Family	Category	Number of Sequences	3D Structure?
F082274	Metagenome	113	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0326765_1055972	F082274	AGG	MVEVVVKKKTKTEVFWSDFIPYHGDFKSLSFTASAEPWQVVLRLRDSLINRPVSELNDSLEDYLEAAYSLGEIAGYAVVLEELYNLGLAKDFLERPKNLARLQKLAFELYWLTLRLERTRIRRNESLAQKTAKLSYALYRLFERALKAAKAELPRSS