Basic Information | |
---|---|
Taxon OID | 3300032954 Open in IMG/M |
Scaffold ID | Ga0335083_10268554 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 1515 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil → Soil Microbial Communities From Loxahatchee National Wildlife Refuge, Florida, United States |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | USA: Florida | |||||||
Coordinates | Lat. (o) | 26.5052 | Long. (o) | -80.2345 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F025829 | Metagenome / Metatranscriptome | 200 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0335083_102685543 | F025829 | GGAG | VKRLPAAMPGTISAADRLLRSACPPDARRQAGDLLLTLAAVECHASCGGPALVPPALLRDLVIITARMAGRTWLDANADGAAAFTALQATSQPPPLPELDQILAQVLSDRFRLLAN |
⦗Top⦘ |