Scaffold Ga0302127_10013605

Overview

Basic Information

• Taxon OID: 3300032151
• Scaffold ID: Ga0302127_10013605
• Source Dataset Name: Marine microbial communities from Western Arctic Ocean, Canada - CB4_SCM
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4884
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (62.50%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada

Source Dataset Sampling Location

• Location Name: Canada: Western Arctic Ocean
• Coordinates
  • Lat. (^o): 75.0007
  • Long. (^o): -150.0027
  • Depth (m): 81

Associated Families

Family	Category	Number of Sequences	3D Structure?
F098082	Metagenome / Metatranscriptome	104	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0302127_100136058	F098082	N/A	MILCAMFSVTATAGILKLETTEVPQSIYPLDVDPVDFEAILTTYNTYITAFEDSDFHAMADQMDFKSKSLTWSNRLDAIDNFSFIKDHILPDYSHSDAFDISFISPKVGGYVLFIQRIDKNVYDDRISSGWSFYEFQKTDTEWKISSITNLPSLRSPF