Scaffold Ga0302120_10005275

Overview

Basic Information

• Taxon OID: 3300031701
• Scaffold ID: Ga0302120_10005275
• Source Dataset Name: Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5799
• Total Scaffold Genes: 17
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 4 (23.53%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada

Source Dataset Sampling Location

• Location Name: Canada: Western Arctic Ocean
• Coordinates
  • Lat. (^o): 70.5467
  • Long. (^o): -122.9077
  • Depth (m): 625

Associated Families

Family	Category	Number of Sequences	3D Structure?
F096642	Metagenome	104	N
F105354	Metagenome	100	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0302120_1000527515	F096642	N/A	MKNKNENTNELTFRGWHNDENETFTGVRNDSHGNDCRDHDQDAWNFEIDETDCWK
Ga0302120_100052752	F096642	N/A	MKNKNENTNELTFRGWHSDEKETFTGVHNDSHGNDCRDHDQDAWNYEIDESDCWK
Ga0302120_100052758	F105354	N/A	MKNKTQITEAQLLLNQEVKINRGQFAGKTAFVREVMADGRSLEVEVAHTSGKIAFVDVTFVSEIQEQTQFAKGEPNLGPVANSVVQGGI