Basic Information | |
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Taxon OID | 3300031675 Open in IMG/M |
Scaffold ID | Ga0302122_10017821 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCM |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3645 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 7 (87.50%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Western Arctic Ocean | |||||||
Coordinates | Lat. (o) | 74.0136 | Long. (o) | -139.5971 | Alt. (m) | Depth (m) | 83 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F022756 | Metagenome | 213 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0302122_100178218 | F022756 | GAG | MIKIKTILNLVILNLIQIILTFSLIVLLTSCAAETRPPLWLQAIETLPEVEGFSRAGLFTINEKIYVQYCNSHGTQLWMRYNEDKNSWRQSRYNSEGCTDGEQA |
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