Scaffold Ga0302123_10256613

Overview

Basic Information

• Taxon OID: 3300031623
• Scaffold ID: Ga0302123_10256613
• Source Dataset Name: Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 859
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada

Source Dataset Sampling Location

• Location Name: Canada: Western Arctic Ocean
• Coordinates
  • Lat. (^o): 74.0136
  • Long. (^o): -139.5971
  • Depth (m): 139

Associated Families

Family	Category	Number of Sequences	3D Structure?
F029898	Metagenome	187	N
F033643	Metagenome / Metatranscriptome	177	Y
F069450	Metagenome	124	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0302123_102566131	F029898	N/A	VLDFTGQIGYTIDSVMRKIIEMIKKIMKKDSVRTQELKYQREYDGEVNNYFVNIFEDWADHYIAYTYDKHGANCGVKRFNKGNIQEMKPAERNFAFVSA
Ga0302123_102566132	F033643	N/A	MDKEIYTMFSASEIYPGFSMTFANDWEISVQWGRNHYCANRDNPNKESRRSRTAEVAIFAPDKDGFPRDWWSYDEDLNKVVEQPDETYVNGHLTTDQVANIIAIISKKSA
Ga0302123_102566133	F069450	N/A	ERVKQLKEAAARYPKSDWSEGSYNDIFRKAADAKRKKYGTTCSYNGY