Scaffold Ga0302123_10058167

Overview

Basic Information

• Taxon OID: 3300031623
• Scaffold ID: Ga0302123_10058167
• Source Dataset Name: Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2117
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada

Source Dataset Sampling Location

• Location Name: Canada: Western Arctic Ocean
• Coordinates
  • Lat. (^o): 74.0136
  • Long. (^o): -139.5971
  • Depth (m): 139

Associated Families

Family	Category	Number of Sequences	3D Structure?
F030560	Metagenome / Metatranscriptome	185	Y
F070563	Metagenome	123	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0302123_100581671	F070563	N/A	QGLPGGAAAASTKRGNVLTYKARYAASYATGLTFGGASTGASTPPMTGFQTSYGSELLYTRGIYAGSTGVDQVYDENVIGQPAYGIRAIVRRNLLNLNDGDVMTANKNFVALHSTPSLRIISLDCKPRAMTEAQAEKVAKLGIYDGFKATFTPAGSSDPQTRILRVEGVRHDITPNDWSMRLTTSGSGENVFLILDSALDGHLDTNKLAP
Ga0302123_100581672	F030560	AGGAGG	MAQQTFAGVPTEFTAGEVLSSADQNLLRNYLIAQIKEGMTGDTGEILPMIMDLTNNRIELDSGGLKFSDATTQTTAASSPDPAEENLIVGLEMFL