Basic Information | |
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Taxon OID | 3300031622 Open in IMG/M |
Scaffold ID | Ga0302126_10005934 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 6371 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (57.14%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181 | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Western Arctic Ocean | |||||||
Coordinates | Lat. (o) | 75.0007 | Long. (o) | -150.0027 | Alt. (m) | Depth (m) | 20 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F052202 | Metagenome / Metatranscriptome | 143 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0302126_100059344 | F052202 | N/A | MIDKKVAYEELNLLPIWLNKIRQKKIKYASFNIGLYFFKEINMSIMVPELDKLRTDEKELFKNVHIYINSISENSKYLRNIEEGEVDAVLKKNSILHIFLLGSNYPMELNDFDASIKSLPSLDEMLVNPDKKKKLWHDIQSLLSDEMKENN |
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