Scaffold Ga0302137_1057010

Overview

Basic Information

• Taxon OID: 3300031588
• Scaffold ID: Ga0302137_1057010
• Source Dataset Name: Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1592
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada

Source Dataset Sampling Location

• Location Name: Canada: Western Arctic Ocean
• Coordinates
  • Lat. (^o): 80.9595
  • Long. (^o): -132.1842
  • Depth (m): 45

Associated Families

Family	Category	Number of Sequences	3D Structure?
F032443	Metagenome	180	Y
F047361	Metagenome	150	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0302137_10570101	F047361	N/A	YDGEEIQHNHEKSFCLISLSEEEPEQIIHTLNKVFPTDHVAVFLWPKGNGDFSNPMLKHACVHARFTVVDKKATPLFLEEDVLVEKKTYVVTEQETWEDIFTRIKKDKFK
Ga0302137_10570103	F032443	N/A	TALAAEPYLTRRTLLIAGNEAVDVQVTLEKANCSSLRTYTDTLSDNSAFIGLAEDTQLRKLMTRVSQNANWANYFNDYEKNSANLNPIYTTDVDSDKASIIDAVLRDSGLPDVLDFVDIEAVANKANKDARIDTKGYDLLTVEQQIADACKQLGIATDNRSIYNQSESLLNNLNLRDRTIIAEQLDLNQDADTLS