Basic Information | |
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Taxon OID | 3300031227 Open in IMG/M |
Scaffold ID | Ga0307928_10010763 Open in IMG/M |
Source Dataset Name | Saline water microbial communities from Ace Lake, Antarctica - #232 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 6565 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 7 (87.50%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter olleyae | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water → Saline Lake Microbial Communities From Various Lakes In Antarctica |
Source Dataset Sampling Location | ||||||||
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Location Name | Antarctica: Ace Lake | |||||||
Coordinates | Lat. (o) | -68.4725 | Long. (o) | 78.188 | Alt. (m) | Depth (m) | 24 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F089825 | Metagenome | 108 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0307928_100107635 | F089825 | AGGAG | MPNPAVDFPWEKLNVTADVIVKTGPCVLHSITFNGMTVVGDVLIYDGIDNTGTLISTLILRSAVHVSCQPFTIVLDCGMVTGIFFDYGATFAGNFTVTFK |
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