Scaffold Ga0073988_12301137

Overview

Basic Information

• Taxon OID: 3300030780
• Scaffold ID: Ga0073988_12301137
• Source Dataset Name: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_S19_0.2 metaT (Eukaryote Community Metatranscriptome)
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 502
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Source Dataset Sampling Location

• Location Name: Southern Atlantic ocean
• Coordinates
  • Lat. (^o): 5.9
  • Long. (^o): -41.25

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002883	Metagenome / Metatranscriptome	523	Y
F059056	Metagenome / Metatranscriptome	134	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0073988_123011371	F002883	N/A	HLLIMSTLHHEDMLLDIFDQVQEAFPYLDEEKQIEIANQRFEDLLQ
Ga0073988_123011372	F059056	N/A	MTGLELFILIGGCYALYTVGMAIATTIDYHTYNKDEQLVKR