Basic Information | |
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Taxon OID | 3300030743 Open in IMG/M |
Scaffold ID | Ga0265461_12985706 Open in IMG/M |
Source Dataset Name | Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 568 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil → Forest Soil Microbial Communities From France, Sweden, Spain And Usa, For Metatranscriptomics Studies |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Quebec | |||||||
Coordinates | Lat. (o) | 47.2736 | Long. (o) | -71.1993 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F007873 | Metagenome / Metatranscriptome | 343 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0265461_129857061 | F007873 | N/A | GDMVVLPGTSSAVLVKTIRLGQGGFIFTVAPVGDDRIQAERLVTLTAAARLRRPGQDLAG |
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