Scaffold Ga0119944_1001091

Overview

Basic Information

• Taxon OID: 3300029930
• Scaffold ID: Ga0119944_1001091
• Source Dataset Name: Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Hong Kong
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4851
• Total Scaffold Genes: 17
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China

Source Dataset Sampling Location

• Location Name: China: Pearl River Delta area
• Coordinates
  • Depth (m): .5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F036214	Metagenome	170	Y
F082606	Metagenome	113	N
F097251	Metagenome / Metatranscriptome	104	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0119944_100109110	F082606	N/A	MSLIVLSAQCAGMVAPVIPLGQKTYKMSPNSRGVRAERDLWRFHPGMPCYVRGWPQVEATVIAKVEGCSWPTYIVQSFSTGASYQVSQLYLSKRPIEQR
Ga0119944_100109112	F036214	N/A	MDHEAWDWMTLKPDPTSAFNVEKEARRLENTPNAGPIAAQLYRAWNMQQTLLQQATNRIAALELQLMKNQADA
Ga0119944_100109113	F097251	N/A	MSTMIILTDSQLVELNNRLGQIQRLIETAQVIKAGGIAQPKAVTEAAETPSVVGKRRKAKRKRGALNEQKVAEIKARLAAGNESAQKIADDYGVHFTTVNLIKYGKTWKNVQASA