Scaffold Ga0119944_1000096

Overview

Basic Information

• Taxon OID: 3300029930
• Scaffold ID: Ga0119944_1000096
• Source Dataset Name: Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Hong Kong
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 14004
• Total Scaffold Genes: 22
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 13 (59.09%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China

Source Dataset Sampling Location

• Location Name: China: Pearl River Delta area
• Coordinates
  • Depth (m): .5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001190	Metagenome / Metatranscriptome	753	Y
F003889	Metagenome	463	Y
F082558	Metagenome	113	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0119944_100009614	F003889	AGG	LITNPKIRKKAFWVVGPEYIAIAITSIASALTGGTWVANRILDRQNERVQNAIDYTSSQKRRVDALEDQLNRLPLDYVLKVDFLREIQEMHDNFRQINVKLDKLMEKLLSK
Ga0119944_100009618	F082558	N/A	MKRKKLVKKALKQPELYTPAEIAYFKRWLWQKKQDKKTAKIQLKQEANS
Ga0119944_10000967	F001190	N/A	MADTSTDTSALLSDLPAGQTGIEGDYFDITKFEKLLNRLEASKGRQQRQKSLESRRDIFAQGLASMMSNF