Scaffold Ga0311363_11124161

Overview

Basic Information

• Taxon OID: 3300029922
• Scaffold ID: Ga0311363_11124161
• Source Dataset Name: III_Fen_E1 coassembly
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 672
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen → Peat Permafrost Microbial Communities From Stordalen Mire Near Abisko, Sweden

Source Dataset Sampling Location

• Location Name: Sweden: Abisko, Stordalen Mire
• Coordinates
  • Lat. (^o): 68.3532
  • Long. (^o): 19.0469
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004408	Metagenome / Metatranscriptome	439	Y
F046392	Metagenome / Metatranscriptome	151	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0311363_111241611	F046392	N/A	MNIRVDKQKAIGKWGKVLESMGVTDADRIDWMSEYAELHAINENAYANASNVAGMGNVVSAQ
Ga0311363_111241612	F004408	N/A	HFLKFLNKNQVDSFYGLENQEQEQVKLYLNEKKYYSNSEVIKLITEALAVTNESLEDRLIRLMPEQIKPIWSQLNESSKKSVLSQGRLYPNLENDSNIEHFWLTRQLKKNESVTKQLLAKESIINEDVLSDTDFVAIMEKLKRLS