Basic Information | |
---|---|
Taxon OID | 3300029915 Open in IMG/M |
Scaffold ID | Ga0311358_10052526 Open in IMG/M |
Source Dataset Name | III_Bog_E1 coassembly |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 4652 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog → Peat Permafrost Microbial Communities From Stordalen Mire Near Abisko, Sweden |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Sweden: Abisko, Stordalen Mire | |||||||
Coordinates | Lat. (o) | 68.3532 | Long. (o) | 19.0477 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F003261 | Metagenome / Metatranscriptome | 497 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0311358_100525266 | F003261 | N/A | MAQAGHYAEFCMRNSGKMTPTLFLIGTDGPVMFVPTSLADESEKDAFATTARLMCIAHAATVCVMAMEAWMKTAKPGEKLDMTEPPSEAFDRQEVVVLMGEDRTGQKQKFLPIIRSGNGKFFGFNESDMPQLDSIEGRFAGILPPNVATDEHRTLAKVMLKVKGVNVTK |
⦗Top⦘ |