Scaffold Ga0245292_100281

Overview

Basic Information

• Taxon OID: 3300029853
• Scaffold ID: Ga0245292_100281
• Source Dataset Name: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37209
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 86962
• Total Scaffold Genes: 118
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 26 (22.03%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Source Dataset Sampling Location

• Location Name: United Kingdom: London
• Coordinates
  • Lat. (^o): 51.5
  • Long. (^o): -0.12

Associated Families

Family	Category	Number of Sequences	3D Structure?
F060985	Metagenome / Metatranscriptome	132	N
F089054	Metagenome	109	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0245292_10028138	F089054	N/A	MLTSGKFLVSFEVPGPLPGTTEGFCEEMNVVYRTEELNTYLRYPKQEINPWDKHSTYIRLKLREILKVNLTDITIIDIISLP
Ga0245292_10028143	F060985	N/A	MIKVEKAKNNFTIEMRIFENYEKVKYEIIKVIDFLRHAETNLGMCRIFDNQNHELWHSVIKPWFQPERFGITYLWFHSGFSHIGYGEYHIIRTNRWLKTPIERINREDYIFGYWFPTYKKYIPYRIRILKLALKDLERIKEEYGKD