Basic Information | |
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Taxon OID | 3300029822 Open in IMG/M |
Scaffold ID | Ga0134854_1027469 Open in IMG/M |
Source Dataset Name | Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Chongqing University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1612 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (80.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud → Liquor Fermentation Pit Mud Microbial Communities From Chongqing University, China |
Source Dataset Sampling Location | ||||||||
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Location Name | China: Chengdu | |||||||
Coordinates | Lat. (o) | 30.65 | Long. (o) | 104.06 | Alt. (m) | Depth (m) | .01 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F004383 | Metagenome / Metatranscriptome | 440 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0134854_10274693 | F004383 | GGGGG | MTSDNLLERAFMARLRADEYRAELKALEKEFNEREDVIEIKRKIDRCEEERRQCIEQAKAAGISKMGNYLLKIRTRKTRTVVPKLFFAKHGAEAFIECCTVAIGKAEALLGKSALDDCCEVEVRETGVSVEYVRPEAVE |
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