Scaffold Ga0183757

Basic Information
Taxon OID	3300029787 Open in IMG/M
Scaffold ID	Ga0183757_1002999 Open in IMG/M
Source Dataset Name	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	CEA Genoscope
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	6343
Total Scaffold Genes	19 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	4

Taxonomy
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location
Location Name	Mediterranean Sea: TARA_018
Coordinates	Lat. (^o)	35.7528	Long. (^o)	14.2765	Alt. (m)	Depth (m)	60
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F008022	Metagenome	340	Y
F009491	Metagenome / Metatranscriptome	317	Y
F059877	Metagenome	133	N
F070651	Metagenome / Metatranscriptome	123	N

Family

Category

Number of Sequences

3D Structure?

Metagenome

340

Metagenome / Metatranscriptome

317

Metagenome

133

Metagenome / Metatranscriptome

123

Protein ID	Family	RBS	Sequence
Ga0183757_100299910	F059877	N/A	MKSNKFIAAAVAATLALTSCESRQEQYEQDLLDACNVKIMSDNYVKTTAISSCTXXXNLPGIDDVRYDKYEFYAMLDGRKVKGFQNLKDQVGKVSQGLIEGNINMQLSGHDDLAVYLLHENMYKAQFFVENGDGQLFELQLNEVY
Ga0183757_100299918	F008022	N/A	MTTTELQAKIEALQAAFDTKVQEQNAYRSQIDALKKQLTDLNKPKLTMAQFDELTESVEYGIGNFDFSDTDNYSIDFGLDYDGRVHCESLEFDNADELAREICEKVYEMFGEANEDNNQENQD
Ga0183757_10029994	F009491	N/A	MSNSISKNQIQILKLNNKTYLPFQLHQLPKYFDKYTTDYFSLKGYCYISLDDVLDNNPYFNLKNFKDRLTFNKDIHYTLKR
Ga0183757_10029998	F070651	N/A	MKITIQQIGKTYIANDSEEVKVIHNHDSIIKVAGEYYKNKLTNEWISEDEYYDSLFLKLQEDESNKYY

Protein ID

Family

RBS

Sequence

Ga0183757_100299910

N/A

MKSNKFIAAAVAATLALTSCESRQEQYEQDLLDACNVKIMSDNYVKTTAISSCTXXXNLPGIDDVRYDKYEFYAMLDGRKVKGFQNLKDQVGKVSQGLIEGNINMQLSGHDDLAVYLLHENMYKAQFFVENGDGQLFELQLNEVY

Ga0183757_100299918

N/A

MTTTELQAKIEALQAAFDTKVQEQNAYRSQIDALKKQLTDLNKPKLTMAQFDELTESVEYGIGNFDFSDTDNYSIDFGLDYDGRVHCESLEFDNADELAREICEKVYEMFGEANEDNNQENQD

Ga0183757_10029994

N/A

MSNSISKNQIQILKLNNKTYLPFQLHQLPKYFDKYTTDYFSLKGYCYISLDDVLDNNPYFNLKNFKDRLTFNKDIHYTLKR

Ga0183757_10029998

N/A

MKITIQQIGKTYIANDSEEVKVIHNHDSIIKVAGEYYKNKLTNEWISEDEYYDSLFLKLQEDESNKYY

NMPFamsDB