Scaffold Ga0167330_1004531

Overview

Basic Information

• Taxon OID: 3300029781
• Scaffold ID: Ga0167330_1004531
• Source Dataset Name: Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP11 - Uppsala-digested 112
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Gothenburg
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3859
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (87.50%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids → Sewage Microbial Communities From Wastewater Treatment Plant In Sweden

Source Dataset Sampling Location

• Location Name: Sweden
• Coordinates
  • Lat. (^o): 59.844519
  • Long. (^o): 17.659844

Associated Families

Family	Category	Number of Sequences	3D Structure?
F012026	Metagenome / Metatranscriptome	284	Y
F080087	Metagenome / Metatranscriptome	115	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0167330_10045311	F080087	N/A	EMEHATAWKTSETEYDVRVPARYREYTCSHRVVAIYRRYGIITDYQYRVSKKELEEIERIVETRIEPTNDKGGQR
Ga0167330_10045312	F012026	GGAGG	MNLRELQTSIANIIGKRAEAINILHRLEKVEDRFNPKIIAEINGYRQAVEELSKELNRLEVEKGALLEAEEAARKEYIAALNAYDELYGRFPNAEKEAAELLKRYAKHVEAARRAREILMTKMTALAAVSGAYVPIPPQIGHAWREYAREYAFAIERGGD