Scaffold Ga0245167_100075

Overview

Basic Information

• Taxon OID: 3300029681
• Scaffold ID: Ga0245167_100075
• Source Dataset Name: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_36794
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 156340
• Total Scaffold Genes: 195
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 84 (43.08%)
• Novel Protein Genes: 20
• Novel Protein Genes with Ribosome Binding Sites (RBS): 8 (40.00%)
• Associated Families: 20

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae (Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Source Dataset Sampling Location

• Location Name: United Kingdom: London
• Coordinates
  • Lat. (^o): 51.5
  • Long. (^o): -0.12

Associated Families

Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F050794	Metagenome	145	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F075481	Metagenome	119	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078005	Metagenome	117	N
F078006	Metagenome	117	N
F080673	Metagenome	115	N
F083451	Metagenome	113	N
F083452	Metagenome	113	N
F085718	Metagenome	111	N
F089590	Metagenome	109	N
F089591	Metagenome	109	N
F093883	Metagenome	106	N
F098313	Metagenome	104	N
F102167	Metagenome	102	N
F106193	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0245167_100075100	F093883	N/A	MEEDKDIKKDIRDYLKEEADTHIRHWLAIKRESKRLYSEIEDRTKKIALKSSSLIKEDDFVALHEMTHKIQMLNIEAVKANSRLMFIIQFATSFGMDLDFDTTYASTAKSIMEDRTSGFVFYDDKERLKYADKELEDMFHDMSVTEVSKIGVVQSYELLMKQYNEFKDMKANATGKTKAD
Ga0245167_100075105	F058555	N/A	METKIRILHIMKSNFDKIITERYTPRNIQAKKDELGCVKLPAGSLICPVDFKPVTNKEGKKVTAIKYSLKHEEYHGSGIQISDECKMAMIYLIIINVFKHVFLRNRMHGGNRDQIEINTNDFIDILSDGCAYFCYRHVLRDSHEDMNYQLISLKAWAEGEIMIALSDIIKYKHKASKTPRIKDMFVKKGESVYTCLDKNLDSNTRRWMANKSRKLNRVKMLSKIIFSARNRNINKIYKVTKKRTVKFNVSYLMDRLNIKLSKEGMMLISQRTVYRMIKEVLSMCCKTISDLYDEVKKNNGIVNTKDRKNVTIGHLRLSYRGTIMHIIIAEDFIKDVFLGVKGVEMSKAG
Ga0245167_100075121	F102167	N/A	MDINQIKKYLPAGWDVVDLIDHGIIDLDIMNGKMIGEYVAVLMIKSYDRITESHNLTSFSFHDKDMGGLRRLVSNAIMAVGLRNNTLKGDGNTAIK
Ga0245167_100075124	F083452	N/A	MSGRIKIKPKNKDKKTKIDVFKVIEGRFKNMNELRDLIDMDPRKGLVRIRDGAGFREVERGGCLHRNYLNLLEEELGAKLSIDMIDKYVKRK
Ga0245167_100075128	F057001	AGG	MTSKELNKVQKEVKKASEKTLTGAVKAWCQLFKSGKDINEILKDNDIKVDKAVVPALVSLAKDKEVVIQLCKEILPRVNNTFCAYKEVEREYYDKQDQANNSKLPLDKVNSIAILGNTHKRFGYCEPVAYSDTDNVPYYEVFNGSDKRIVKCAVPIKRYTYNLIAKCITYYLTHPKNDR
Ga0245167_100075133	F080673	GGA	MKLQDEALLYLRDNITREEAYYILTKENEMTEVLIAKKKDGSKRIKILDMEYTIERDDMLLLFDTDGIIDECLLTSSHIGINMYFRRQDIRDILSKKLEVMEYRYIKIQVDNIPVVEKRRVILDLTGHRVDRNDRDKIDFMFVYYMARLCV
Ga0245167_100075138	F078006	N/A	MIRGQFPAPWHNLNVSSMEDDILKRAAAELKEAGCRVFAWQDDTYNRGWSKGDYIMLYYAFPDSPNIGYLSHGEYGMSVAYSRAYIPSRGSGSGCCIKEEATFDLATALDVLNEPLPRWCKSYGVYPEQYKDIDRWYNSDNYNKKIFKEI
Ga0245167_100075140	F085718	AGGAGG	MVIEFDFEIYKRGDYDKVYLRSGKEVRILCHDGKGNYPIVGMFDHYEGNAYTILRYDKTGRRYNDRRSSLDLMLSVKEREPELWVVVISYMDNKDKRQKMVLPNFFSKNIRGNIYLQGSSKSSVSYYVDKLEEDGCFDELCEKIRVKRDRIYNMEIISLSDDETAV
Ga0245167_100075167	F078005	N/A	MKKSKFVKELERIIDMVKAEDDGFEYGGKVIFYKEDDDNCEINVKNIEMNLGVEANVMAGMDDMDFTCLMSEVYKQKAVKAIMMEKDDDEDN
Ga0245167_100075186	F083451	N/A	MDKSEKEKQILDLLMSRKDIRKLVEKSNECYSKMDFVGAMRYRQEIKDIVDRESKIMLTKSESLIGLMNDADNEYKFNMLVWLHSMMCMADVFNGILEDFKDGVRKANGNSKFVKFDNLDRLMMECKKEIDYLMKGTSKSFQISFAVRSDEMREMIENMVGDNIREGYDMFKEEAKMTKETDRSKIEEFNKKLDHDQM
Ga0245167_1000752	F076653	AGG	MTIRDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYGCEYAPIDISSALQTLIRLTENAKHMFEDQPGVYDMIPYRGFFLRDDFLSGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGFILAKELGYDINSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFMGKRYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYNKGFKKRLAKRFNESLRGGGDLFGANLACMVCDRRDIDWEALRLWLDKYDDPTDKGMVNSPIQFMYLYLYYTFNK
Ga0245167_10007526	F098313	N/A	MREQEFDFVVYPLKLIITVGLDYETLCNRFENMEPDHKGEWGDKDDMDKEASFVNLVRDRDDDGKFAILWNFSSDDDIMMRNICHESFHIAMSVCQFCNMSLGFKVGEDEHAAYIAGFAGDCVSKFINSKNTD
Ga0245167_10007544	F050794	GGA	MQDLRIQRVKVLMMLYTSHYFVNNRQRQLLDHTYALSRDQAFDYMTEFNKRLSDKIGIECTMDTLLPTDDDNANIIIEYNGIIKKLMREAERLELDTDAIKDMMCDLLNELKGDIDFNILIFDVTQLLIKYNLFRLDAITEQEFKDSFVRMDSRNMEIKKLTLSDIKKVVEMIETRYNRFVW
Ga0245167_10007547	F077313	N/A	MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLPAPVNPLGIYSLDTPDQLRTKYANAFDQDSVFPASFKGSLQRIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQDREARQRRQSQMQYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVTQPGEAPMEAMGQKHADGGTPVSLEQGTEVITDDTTIEPDFAKYIRDTYGIKSTPKDTYATLMDRYKVKIGLKSAYDDQKKALEKLKKNDKIDDENTRRLNASVLSKAINDSNDTVNGLEGRFTDFANVIHKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIADAKKELLKKVAGIRQKMEKGGSSLFDYLLTFRPVENKYNNKDNTFGYQRQGQDGSYGGINTDERLEYYKTFMPLAYDAYMSAPKATAAKALQDAIYSTTGGWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKASYHDRMRDNKFGQYSSSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGSMDIGDVEEPDVKLDMPELIDPNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVETNRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGRYINEVEQGNVAQRAWADNVNARTWADTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG
Ga0245167_10007556	F064725	AGAAG	VIQLAREGRLDFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLICEIPGGDKAEADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITERIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNTFNKYIKII
Ga0245167_10007575	F106193	N/A	VGCNTCKEKALRAERERIERSMMNHSSSTVVSDMEYASRSTAGCMVMQDPLQTMERDVVSIYKQVRTKGGGVGVSYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRAKYIKP
Ga0245167_10007579	F075481	AGAAG	MIRLRISLKAVFCLGLSLFLSSCGSRRQVSDTSIDNRLISRIETMIDEVMDRKIVEIKTSDLSADIVITERKFDTDKDVDPATGERPVSSQTDTHIVIGRRDSTVTADSLGIDKTRNDIKNMDNKIDIKSKDVDDKDESKWPTAIIFISILGILVVLFVLLKRLGLIK
Ga0245167_10007580	F089590	N/A	MWYKMKDKDMIERVGALWNIALAYGASCWAYFQPVHHLLTVLLIVLIANFLARLAQSVRGWKLRRSRRRRFSFKRWLREVRFTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILTVTKYGVYIALVGYVMLFLNTIGDAFADAYLVKVFKSVFKRINVFKMFGFSKNIPDEMFDDIKKIADDKVKDKS
Ga0245167_10007584	F042095	N/A	MAKTLYKYEASSNKFVWFTTWDRALRNYYNDDYNYVPDPVVGNPYNTFVEFRSRKPGMANVDWGDGIKEQFPMTKVQGRDDYCIIFRSLAIQHRKNPNTTWWFRKEDGSQYVPIDNHAYADGRRDVQRAVSIDFTCDIYYANIQVCKMTSFPIVDIPGLEFLIVSHTKYVNDGIPVDRLSRSKKLIYIDLQNIGQRMTVIPEAITSKTEVYYLNMFNMLDLRDIESSGIRNIKNMKNLKTLDLSSCYLDRYIKEFNDLPKLKTLNITPGPSDMWNYFDLNTVPAFEVDKINPNIYSFIFLRDWMNGEIRTGWNDDNMSGRGLEHLTDFNADHCNNLRMDKLPDYIYEMRAITWFGVSCSTHTQKRSDDFVDSFYKLVTEWDQITMTSVAKDGKRNQFYSLSVSMYNAISPTENQRPSGTEQAPEGFVKGSSNGSPATPMEKIYVLKNNYAQRWMIKPE
Ga0245167_10007592	F089591	AGGAGG	MTIQEAYLRSLQKNEQNLANGGIKLDPGRFVLLFNEAQDRLVKYYLNRKDDETIRSIQNLLVYWMSLDNAGRMDDPESTSFNLPDDYLWFSNIKGVFSYKGCEATDFVMWEAKNENIHELLGDENNRPSYDYRETFYSIGNGKVVVYESGFRTEEVKMTYYRRPVRVDLSGYINAAGIQSTDIDPELPDYLVEEILDMVAKQFNLNENELYRYRIDKDNVASFK