Scaffold Ga0167329_1018344

Overview

Basic Information

• Taxon OID: 3300029440
• Scaffold ID: Ga0167329_1018344
• Source Dataset Name: Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP10 - Uppsala-digested 111
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Gothenburg
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1731
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids → Sewage Microbial Communities From Wastewater Treatment Plant In Sweden

Source Dataset Sampling Location

• Location Name: Sweden
• Coordinates
  • Lat. (^o): 59.844519
  • Long. (^o): 17.659844

Associated Families

Family	Category	Number of Sequences	3D Structure?
F023356	Metagenome / Metatranscriptome	210	Y
F045118	Metagenome / Metatranscriptome	153	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0167329_10183441	F023356	AGGAG	MSENSLKKAVLESRASAAEAEAMSTELKKSKVITLRVEEPLFKAIEAQAELWKVKPAETIRRVLWFYFLPAALEMQLRGESEKFWKGELTPEAAGEYMVFTLEAVEKLRSSAMFLSREA
Ga0167329_10183444	F045118	N/A	EFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRSLYGFTRVNELFHGGYEVVKEKQVENWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAXXXXLRESF