Scaffold Ga0185543_1090578

Overview

Basic Information

• Taxon OID: 3300029318
• Scaffold ID: Ga0185543_1090578
• Source Dataset Name: Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 601
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: Indian Ocean: TARA_038
• Coordinates
  • Lat. (^o): 19.0393
  • Long. (^o): 64.4913
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F054094	Metagenome	140	Y
F062823	Metagenome	130	Y
F066698	Metagenome	126	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0185543_10905781	F062823	N/A	DKNMIELLSIIFVESPIGLSIILVGGILVLGYMGYKSS
Ga0185543_10905782	F066698	N/A	MKHPCQGPNCHTYSTKDRFHKSTKRLRGRNAYHSVDGGYGVYTIFCTTGCQNDWINANIENIVNQRPITFNRERKFSDDTYHLGPSGWLRKDGVDNE
Ga0185543_10905783	F054094	GGA	MESQKDNNDYTRRNRFTGESIELTKEEAEKHDKIFYHEALATLEDKELGTGASKHWQ