Scaffold Ga0167179_1015932

Overview

Basic Information

• Taxon OID: 3300029252
• Scaffold ID: Ga0167179_1015932
• Source Dataset Name: Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP26 - Henriksdal-digested 138
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Gothenburg
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1733
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dojkabacteria → Candidatus Dojkabacteria bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids → Sewage Microbial Communities From Wastewater Treatment Plant In Sweden

Source Dataset Sampling Location

• Location Name: Sweden
• Coordinates
  • Lat. (^o): 59.310676
  • Long. (^o): 18.108437

Associated Families

Family	Category	Number of Sequences	3D Structure?
F069750	Metagenome / Metatranscriptome	123	N
F078674	Metagenome / Metatranscriptome	116	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0167179_10159322	F078674	GGAGG	MDALKKAIENRKAPFEVESKAGGRVISLRVSERMEQLLEEQAQEWNMSISDTLRSILNFYFLPPLLLEAWEKKVQALIELDTQQTGKNRADMNAPTQAQRIEPVLVDSEEAEEYAKFINELWDKNVKYWETLRVEALSMSKIALKRLTETVEALRKAREQLKEAEVEQ
Ga0167179_10159323	F069750	N/A	MFELSFFXXXXLQENSFFIEGERFVIKERKSRKGKKTQYYLIRLQPFQYVSSLFPTGEGESYTFDFEQKLYRLERKEHSVTLRFV
Ga0167179_10159324	F069750	AGGAG	LQENSFFIEGERFVIKERKSRKGKKTQFYLIKLPFQYVSSLFPTGEEGGFTFDYEQKLYKLEKKEHSIILKYV