Scaffold Ga0167179_1008393

Overview

Basic Information

• Taxon OID: 3300029252
• Scaffold ID: Ga0167179_1008393
• Source Dataset Name: Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP26 - Henriksdal-digested 138
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Gothenburg
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2745
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (83.33%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids → Sewage Microbial Communities From Wastewater Treatment Plant In Sweden

Source Dataset Sampling Location

• Location Name: Sweden
• Coordinates
  • Lat. (^o): 59.310676
  • Long. (^o): 18.108437

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015605	Metagenome / Metatranscriptome	253	N
F045118	Metagenome / Metatranscriptome	153	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0167179_10083931	F015605	AGGGGG	MLDTLKLMLSEYKVSPESSLRVQPASYEVATGEKVEFPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGTGAFLQFSVPKNYYGSNYFSVGEAGTRASLKKVEGELAENGVLTNLEEAELSRVDTFKNIEPEEPFCSYFSLFSLLRARRAQQRGYGTTFLLSNSSQEFCIYNKLEEMREHGEETSELPETMRF
Ga0167179_10083936	F045118	N/A	TTFLVANSSQEFCVYDKLQEMREHGEETSELPETMRFEHRALTKRKVSSLYGFTRAGELFHGGYEVVREKQLESWKSSLFSFSAEEVVVLGSKQLEQEMRFFQEKFGANWFQYFLKSYGAYSLAKFAGKEVVRNALENLNSERTKVWRTMKLLEEAERELLVLKQEEGSSKTLGELYEELREKVCS