Scaffold Ga0168037_106524

Overview

Basic Information

• Taxon OID: 3300029169
• Scaffold ID: Ga0168037_106524
• Source Dataset Name: Aquariaum water viral communities from Chicago, USA - Oceanarium - OC1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Michigan State University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 754
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Aquaculture → Unclassified → Unclassified → Aquarium Water → Aquariaum Water Viral Communities From Chicago, Usa

Source Dataset Sampling Location

• Location Name: USA: Chicago
• Coordinates
  • Lat. (^o): 41.87
  • Long. (^o): -87.61

Associated Families

Family	Category	Number of Sequences	3D Structure?
F102529	Metagenome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0168037_1065241	F102529	N/A	VSQSRSWAAVVTLGYGYLRGELRKHRQVTCDLLVKIAKGSIKVIETDEFIEFKEV