Basic Information | |
---|---|
Taxon OID | 3300028325 Open in IMG/M |
Scaffold ID | Ga0268261_10026315 Open in IMG/M |
Source Dataset Name | Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 4761 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (57.14%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | laboratory colony in Florida, USA | |||||||
Coordinates | Lat. (o) | 26.0625 | Long. (o) | -80.2332 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F037468 | Metagenome | 168 | Y |
F050744 | Metagenome | 145 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0268261_100263152 | F037468 | N/A | VSTTVITVVLLKNCIDLLSGELGLHASSSGIGKEMIHVQVQGVDEVTREEDCEPMTSPLTDAGVGFMSLDCVACFIGIQNCLFVCLYKCVLVKQ |
Ga0268261_100263156 | F050744 | AGGA | VTLFVIHCNDRTVTVFRKYKAATDSTPFLVMTGHINVVLVLQSCTDSLQVLPGSSSETFPSSSDGTCDVSNTAVQQDTVVVEVGFMAVNEEAPIGIKQEEIPEDIFFPDIKTELNEVSYVCVCVCY |
⦗Top⦘ |