Basic Information | |
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Taxon OID | 3300027984 Open in IMG/M |
Scaffold ID | Ga0209629_10029834 Open in IMG/M |
Source Dataset Name | Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 5059 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Sauropsida → Sauria → Archelosauria → Archosauria → Crocodylia → Alligatoridae → Alligatorinae → Alligator → Alligator mississippiensis | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany |
Source Dataset Sampling Location | ||||||||
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Location Name | Kakamega Forest, Kenya | |||||||
Coordinates | Lat. (o) | 0.2917 | Long. (o) | 34.856 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F037271 | Metagenome | 168 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209629_100298342 | F037271 | N/A | VVLYLLNCSLPHIFCVQNTKLKKKVKYKNFLHEVGRSWISEVQNHCESNSDDLQLPEKQRTPRGPKQDPPGRLSGDFRTHKLEKIVGGGEGKRKFPASPCKVCAAHKKRSETRYICKFCVVPLHKGSCFRKYHSVMSY |
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