Basic Information | |
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Taxon OID | 3300027883 Open in IMG/M |
Scaffold ID | Ga0209713_10036554 Open in IMG/M |
Source Dataset Name | Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3337 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Atheliales → Atheliaceae → Piloderma → Piloderma croceum → Piloderma croceum F 1598 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Arctic Ocean | |||||||
Coordinates | Lat. (o) | 78.8697 | Long. (o) | 8.1122 | Alt. (m) | Depth (m) | 10 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F074568 | Metagenome / Metatranscriptome | 119 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0209713_100365542 | F074568 | AGGAG | VPEGFTFPKQSGAQEQRVGCYVVAAKGQTLVIHKAPEDKAPEDKAETAADGKAESESESDSGTKTPVAFFQCASQIAAFDVAGANVAVCCADGQVLQLRAAVLLT |
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