Basic Information | |
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Taxon OID | 3300027810 Open in IMG/M |
Scaffold ID | Ga0209302_10243052 Open in IMG/M |
Source Dataset Name | Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 849 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Arctic Ocean | |||||||
Coordinates | Lat. (o) | 78.8669 | Long. (o) | -3.2286 | Alt. (m) | Depth (m) | 15 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F049037 | Metagenome / Metatranscriptome | 147 | N |
F060975 | Metagenome / Metatranscriptome | 132 | N |
Protein ID | Family | RBS | Sequence |
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Ga0209302_102430521 | F060975 | AGGAG | MGKTVRRNPVAKHSEEFNKPKTVRDRKKDFYRPDSKREFEEAIEDMGFDEHNRKDAIIVQYQDD |
Ga0209302_102430522 | F049037 | AGGA | MNESPCDTCHNYWICVEGARACSDFKLFYDTGKITHHDRSPNWYIDMPSMAITVRELSERCGFGKETNKLKHWLGLRVYRLIEDPLGFYFLRHLDGGIEDLHEGKSSKRLRYAKAACSQVVLEAKAREGTTRQYDHLGAVVRRQMGRNVAALRGDEDQGED |
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