Basic Information | |
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Taxon OID | 3300027611 Open in IMG/M |
Scaffold ID | Ga0210059_1091058 Open in IMG/M |
Source Dataset Name | Ecteinascidia turbinata endosymbiont from Florida, USA - Sample 2 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1951 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Ecteinascidia Turbinata → Ecteinascidia Turbinata Symbiotic Microbial Communities From The Caribbean Mangrove |
Source Dataset Sampling Location | ||||||||
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Location Name | Key West, Florida, United States | |||||||
Coordinates | Lat. (o) | 24.5512 | Long. (o) | -81.8083 | Alt. (m) | Depth (m) | 2 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F061343 | Metagenome | 132 | N |
Protein ID | Family | RBS | Sequence |
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Ga0210059_10910582 | F061343 | N/A | MDLAQFCEVLNKVSNNETNKENVPPRAPTAPIEQPTQSNDQRVPYPWGWLRKQIPLIQDGVIKFSTNHSLINAYKFWDIDSDTYVVEHDYINTFIAKMTLYQAMFLNQIQIPAIIILVPSSDEQFKLLFRISTFLAKHDDLSLCVFHLQIQPENAPKPPDSALHAHKQIVSLILINAPLLPKSALIKMREFLAALEIITENNSANNPPTNPFTQ |
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