Basic Information | |
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Taxon OID | 3300025174 Open in IMG/M |
Scaffold ID | Ga0209324_10370735 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 903 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (25.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Rifle, Colorado, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Rifle, Colorado, United States | |||||||
Coordinates | Lat. (o) | 39.53 | Long. (o) | -107.78 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F028353 | Metagenome / Metatranscriptome | 192 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209324_103707353 | F028353 | GGA | MKPRIVVALVVLLSGLAGGPAWAFWGGKDSIDDPIDALVTIEVLPLYAEVRLNGALVGTALEIASRGMAVFGARAYTVHISAPGHLPRTLTLVSNSAMPQRVHVDLVPIRKP |
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