Basic Information | |
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Taxon OID | 3300024433 Open in IMG/M |
Scaffold ID | Ga0209986_10135692 Open in IMG/M |
Source Dataset Name | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1291 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean: Black Sea | |||||||
Coordinates | Lat. (o) | 44.288 | Long. (o) | 34.983 | Alt. (m) | Depth (m) | 2075 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F024296 | Metagenome | 206 | N |
Protein ID | Family | RBS | Sequence |
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Ga0209986_101356924 | F024296 | AGGAG | VTDDQLIEDLERAHKFRTYGGAGRTLQGDAAQRLRELTLYIEQLKSDKHWLNEQLLEIRTDLQLAEARLRERS |
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