Basic Information | |
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Taxon OID | 3300024251 Open in IMG/M |
Scaffold ID | Ga0247679_1010504 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1586 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil → Soil Microbial Communities From Purdue University Martell Research Forest, Indiana, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Indiana | |||||||
Coordinates | Lat. (o) | 40.4449 | Long. (o) | -87.0297 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F012271 | Metagenome / Metatranscriptome | 282 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0247679_10105042 | F012271 | GAGG | VRHGAGPSAIYIITYHKLEMNGALPKPAMAEGAEALIDLLEKIGVDFRMSEVRGALEDILRFGSANIPDLWLSDEEMVEKGLVEA |
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