Basic Information | |
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Taxon OID | 3300023481 Open in IMG/M |
Scaffold ID | Ga0257022_1021189 Open in IMG/M |
Source Dataset Name | Marine microbial mat from Loihi Seamount, Hawaii, USA - Ku'kulu Base Individual Assembly |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Western Washington University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1214 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine → Marine Microbial Mats From Loihi Seamount, Hawaii, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Loihi Seamount, Hawaii, USA | |||||||
Coordinates | Lat. (o) | 18.903 | Long. (o) | -155.257 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F104036 | Metagenome | 101 | N |
Protein ID | Family | RBS | Sequence |
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Ga0257022_10211893 | F104036 | N/A | MATTWSQSSGEIAATWVSSSGEVAATWTQSSGEIAAAWLGTELMQFGFLFWEGVDYDWEDEMAYTDTYAASQQTELSGKWEDLG |
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