Basic Information | |
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Taxon OID | 3300022873 Open in IMG/M |
Scaffold ID | Ga0224550_1019173 Open in IMG/M |
Source Dataset Name | Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 965 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil → Peatland Microbial Communities From Stordalen Mire, Sweden |
Source Dataset Sampling Location | ||||||||
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Location Name | Sweden: Norrbotten County, Stordalen Mire | |||||||
Coordinates | Lat. (o) | 68.3535 | Long. (o) | 19.0472 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F018226 | Metagenome / Metatranscriptome | 236 | Y |
F072540 | Metagenome / Metatranscriptome | 121 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0224550_10191731 | F072540 | N/A | QADQYSETGQTQKAIDMYQQVLEKLGAWGSKPDDDLRDATCISRTWTALAELLRRVGRADEAKRLEAQRTELWDHWKAKLPNAQFLLRQSLSQVVPRGTSRSATTH |
Ga0224550_10191732 | F018226 | AGGAG | MRKFGKYLLLVTGFAILAPFAHIPGAVTKVHAGGGGCSVASLHGRYAFLRTGVNNVVGGPIASIGIQTYNGDGTFGLTRLTRSNNGDIQDWTYAPASVDASYTVDADCTGSLFTSDGTKTNNLVVLDG |
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