Scaffold Ga0232646_1192413

Overview

Basic Information

• Taxon OID: 3300021978
• Scaffold ID: Ga0232646_1192413
• Source Dataset Name: Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Marine Biological Laboratory
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 689
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids → Characterization Of Microbial Community From Mariana Back Arc

Source Dataset Sampling Location

• Location Name: Perseverance vent field water column
• Coordinates
  • Lat. (^o): 15.47990499
  • Long. (^o): 144.50763029
  • Depth (m): 3625

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000930	Metagenome / Metatranscriptome	830	Y
F003936	Metagenome / Metatranscriptome	461	Y
F038418	Metagenome	166	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0232646_11924131	F003936	N/A	IFEIFWSAKLELRVVILAIPIIFLYFFWQENKRKLKEKNQERLNQIK
Ga0232646_11924132	F038418	N/A	MTDKNEQWIWFINKVNPKRISRTTLGTFLKDINKGLTTRNTSIQDAKKCVFLTRMDFDKPYIFFCTYNDAIQWKNLNTK
Ga0232646_11924133	F000930	N/A	MEKPKYKVIRWSDDGTEEIWEAPQKPTFQEMYKLINCTTIERQSGYDKDISNRTFDMWCDEESKCKGPEFIKKNERATNAWINWLIRTGHKCMHDDFIAGNVVVYKKI