Scaffold Ga0232639_1237722

Overview

Basic Information

• Taxon OID: 3300021977
• Scaffold ID: Ga0232639_1237722
• Source Dataset Name: Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS925 _150kmer
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Marine Biological Laboratory
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 696
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids → Characterization Of Microbial Community From Mariana Back Arc

Source Dataset Sampling Location

• Location Name: Hafa Adai vent field, Mariana back arc basin
• Coordinates
  • Lat. (^o): 16.96173128
  • Long. (^o): 144.86920936
  • Depth (m): 3278

Associated Families

Family	Category	Number of Sequences	3D Structure?
F016980	Metagenome	243	Y
F019152	Metagenome	231	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0232639_12377222	F019152	AGGAG	MEHTKGILLECNLSEDEINTIIEALSRDYVDNDPETLEKEYQLQGKLREIISTFYTKIDAQKFTQMQVQSVKGSTL
Ga0232639_12377223	F016980	AGG	MKYKELLNQLQHLSKEQLELETLVMIRDKEKFVSPNNGLFYVTEFDEYEQDLETGQPYFS