Scaffold Ga0063085_1002934

Overview

Basic Information

• Taxon OID: 3300021924
• Scaffold ID: Ga0063085_1002934
• Source Dataset Name: Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-1M (Eukaryote Community Metatranscriptome)
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 868
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia → Pseudo-nitzschia delicatissima (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean

Source Dataset Sampling Location

• Location Name: Arctic Ocean
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015173	Metatranscriptome	256	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0063085_10029341	F015173	N/A	FRPARQGMAITLVGLLNALLSILFPLWPWEPFVVMPFVLEYFKSKGKLGNCILFVTIFGAVFCFAHGAGFLQAVDTIAYGGPGICVPALPGAPKDIDTKAMCDMMAIHIFLMLAMGIFLTTLALNSARRLPKGNLDAVYYSRAALFFLVGGISQDIPYFAVILQYPERFGEFMTMDGFYSARWITPGFTEFGAPIVWIVYGLYSYVKLMSMIDATSIPMM