Scaffold Ga0063126_1007293

Overview

Basic Information

• Taxon OID: 3300021883
• Scaffold ID: Ga0063126_1007293
• Source Dataset Name: Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S0 C1 B9 (Eukaryote Community Metatranscriptome)
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 764
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Harpacticoida → Harpacticidae → Tigriopus → Tigriopus californicus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean

Source Dataset Sampling Location

• Location Name: Atlantic Ocean
• Coordinates
  • Lat. (^o): 28.999982
  • Long. (^o): -14.999994

Associated Families

Family	Category	Number of Sequences	3D Structure?
F103287	Metatranscriptome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0063126_10072931	F103287	N/A	SSTSSNASNAGTSSFLVGRDNCQRNAEMELFSQDRKSRSNYRRPSSLGLATTPLPDKSEAKIQFKPMPASRSHIVAPLKDHLKPEGALEKVSEVKANYRNLSPSRPVIHKLKDHLKPEGDFAIKSETGTVYQDNHATRPVIHKLRDHSSDVQPVGSLEKSSEYRSTFAKTMKGERAPPAWISDFEKVTIE