Scaffold Ga0224713_1192469

Overview

Basic Information

• Taxon OID: 3300021554
• Scaffold ID: Ga0224713_1192469
• Source Dataset Name: Marine sponge Stylissa sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - St7is 200bp no Eukaryotes last
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of New South Wales
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 932
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Source Dataset Sampling Location

• Location Name: Upa-Upasina, Papua New Guinea
• Coordinates
  • Lat. (^o): -0.940556
  • Long. (^o): 150.816667

Associated Families

Family	Category	Number of Sequences	3D Structure?
F036270	Metagenome	170	Y
F058913	Metagenome	134	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0224713_11924691	F058913	GGAGG	MKLSAEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Ga0224713_11924693	F036270	GAGG	MHIESTDKQGVFRACKDGHKLLELINDMGWDYDRFSSSGQETYDKICTILATVKEVKDEK