Basic Information | |
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Taxon OID | 3300021516 Open in IMG/M |
Scaffold ID | Ga0194045_1057072 Open in IMG/M |
Source Dataset Name | Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 988 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter → Polynucleobacter sp. JS-Safj-400b-B2 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater → Anoxic Zone Freshwater Microbial Communities From Boreal Shield Lakes In Iisd Experimental Lakes Area, Ontario, Canada |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Ontario | |||||||
Coordinates | Lat. (o) | 49.753 | Long. (o) | -93.798 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F005300 | Metagenome / Metatranscriptome | 405 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0194045_10570723 | F005300 | AGCAGG | MTRKIELDGEAADRITVLNLKEYRGYLKKELKQWKKNPRSDANPAGYWMHPEDVGGNVATITALDLIIKH |
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