Basic Information | |
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Taxon OID | 3300020474 Open in IMG/M |
Scaffold ID | Ga0211547_10028301 Open in IMG/M |
Source Dataset Name | Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3101 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_151 | |||||||
Coordinates | Lat. (o) | 36.139 | Long. (o) | -28.9598 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F007537 | Metagenome / Metatranscriptome | 349 | Y |
F044433 | Metagenome | 154 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0211547_100283015 | F007537 | N/A | MKKLLYLMVIGVIFTSCQKEEFEIERNYQFEMTGRTTQDINGYYYVKLNPQEDRQTLHRFGAYVTNVDKYNLPTQVSWRCDAFWYTPDTLGHTYIEIGNVPTGESPWSWENFAVTGYGGMTVPIVNSTSFADPSVDSIFCMMAPIGAMIGDTVTIYGKAYFEEGDIKLYDSINVIFE |
Ga0211547_100283017 | F044433 | N/A | MENMMNNQGKTDKQYENSARFAGYSIIGMIILIIFLTLFGGCATTHDTSKECCKSKKTSA |
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