Scaffold Ga0211475_10332169

Overview

Basic Information

• Taxon OID: 3300020468
• Scaffold ID: Ga0211475_10332169
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 744
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_018
• Coordinates
  • Lat. (^o): 35.7392
  • Long. (^o): 14.3321
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013777	Metagenome	268	Y
F105000	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211475_103321691	F105000	N/A	RRTIIMHQEIKNREWPYTYNGHVMNESFEKWLKSCPKEYTWQMNEVTKNRGTYTFFLKEEED
Ga0211475_103321692	F013777	AGGAGG	MTKTFTMWGPTSNNHFQNLHNHYLKKNPIVHAYATPYNNDPMVGGNDAAMWSFVMHQKRDLERMAFKSYIHPQGDFQNGYYDICDIEKETFDCDNMKLGEVYPVILYAHHETMLTVGCVVKTSDHPDVVTGEEQLALWIYYPSAENIESFDLASGHIYKD