Scaffold Ga0211713_10081461

Overview

Basic Information

• Taxon OID: 3300020467
• Scaffold ID: Ga0211713_10081461
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1570
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_112
• Coordinates
  • Lat. (^o): -23.1569
  • Long. (^o): -129.5943
  • Depth (m): 155

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007227	Metagenome / Metatranscriptome	355	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211713_100814613	F007227	GGGGG	MHRLSKEEIGYKITDKITQMWLLNPHDHHMLYQRDDGSFYGFSHIKGEDPEEWFWEAHGIQLELFPPEPPKSHKFTQEQLDRAPHHNMLEKYYGKDWEVKPVEGLEDHY