Scaffold Ga0211544_10208359

Overview

Basic Information

• Taxon OID: 3300020443
• Scaffold ID: Ga0211544_10208359
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 766
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_152
• Coordinates
  • Lat. (^o): 43.7649
  • Long. (^o): -16.8935
  • Depth (m): 800

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013096	Metagenome / Metatranscriptome	274	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211544_102083592	F013096	N/A	MVTDVVGDSAVGLSTLSHTNTVAVYEPEALGVHDN